Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.67■□□□□ 0.26
Cdh17Q9R100 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.67■□□□□ 0.26
Cdh17Q9R100 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh17Q9R100 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.67■□□□□ 0.26
Cdh17Q9R100 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.66■□□□□ 0.26
Cdh17Q9R100 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Gm12527-201ENSMUST00000117967 564 ntBASIC16.66■□□□□ 0.26
Cdh17Q9R100 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Trmt13-210ENSMUST00000198454 880 ntBASIC16.66■□□□□ 0.26
Cdh17Q9R100 Gm43183-201ENSMUST00000200632 547 ntBASIC16.66■□□□□ 0.26
Cdh17Q9R100 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.66■□□□□ 0.26
Cdh17Q9R100 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh17Q9R100 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh17Q9R100 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdh17Q9R100 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.64■□□□□ 0.25
Cdh17Q9R100 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh17Q9R100 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.63■□□□□ 0.25
Cdh17Q9R100 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.63■□□□□ 0.25
Cdh17Q9R100 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdh17Q9R100 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms