Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Herpud1Q9JJK5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Herpud1Q9JJK5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Herpud1Q9JJK5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Herpud1Q9JJK5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herpud1Q9JJK5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Gm6576-201ENSMUST00000169678 883 ntBASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herpud1Q9JJK5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Herpud1Q9JJK5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Gm27275-201ENSMUST00000184318 272 ntBASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Herpud1Q9JJK5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herpud1Q9JJK5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms