Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Gm44430-201ENSMUST00000203376 995 ntBASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.42■□□□□ 0.7
Cacna1fQ9JIS7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1fQ9JIS7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1fQ9JIS7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1fQ9JIS7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.42■□□□□ 0.7
Cacna1fQ9JIS7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.42■□□□□ 0.7
Cacna1fQ9JIS7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1fQ9JIS7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Gm2651-201ENSMUST00000203560 838 ntBASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1fQ9JIS7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1fQ9JIS7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Cacna1fQ9JIS7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.39■□□□□ 0.7
Cacna1fQ9JIS7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.39■□□□□ 0.7
Cacna1fQ9JIS7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1fQ9JIS7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.39■□□□□ 0.7
Cacna1fQ9JIS7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1fQ9JIS7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.39■□□□□ 0.69
Cacna1fQ9JIS7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Gm27867-201ENSMUST00000184778 125 ntBASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Gm5864-201ENSMUST00000202263 970 ntBASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.38■□□□□ 0.69
Cacna1fQ9JIS7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Cacna1fQ9JIS7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms