Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2aQ9DB34 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chmp2aQ9DB34 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2aQ9DB34 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2aQ9DB34 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2aQ9DB34 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp2aQ9DB34 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Gm7638-201ENSMUST00000121348 967 ntBASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp2aQ9DB34 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Mir7071-201ENSMUST00000184847 69 ntBASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chmp2aQ9DB34 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp2aQ9DB34 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms