Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Gm7370-201ENSMUST00000219471 767 ntBASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rsph9Q9D9V4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 AA414768-201ENSMUST00000121924 1257 ntBASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rsph9Q9D9V4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph9Q9D9V4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph9Q9D9V4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph9Q9D9V4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph9Q9D9V4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph9Q9D9V4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph9Q9D9V4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph9Q9D9V4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rsph9Q9D9V4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms