Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp4cQ9D7F7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Gm37856-201ENSMUST00000191634 999 ntBASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp4cQ9D7F7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Gm13158-201ENSMUST00000122007 736 ntBASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp4cQ9D7F7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Mir6349-201ENSMUST00000184059 97 ntBASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp4cQ9D7F7 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Gm10418-201ENSMUST00000100943 576 ntBASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp4cQ9D7F7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Trmt13-210ENSMUST00000198454 880 ntBASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Gm18025-201ENSMUST00000221733 862 ntBASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp4cQ9D7F7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp4cQ9D7F7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp4cQ9D7F7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp4cQ9D7F7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp4cQ9D7F7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp4cQ9D7F7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp4cQ9D7F7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.39■□□□□ 0.85
Chmp4cQ9D7F7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.39■□□□□ 0.85
Chmp4cQ9D7F7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.39■□□□□ 0.85
Chmp4cQ9D7F7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms