Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Upk1aQ9D132 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Upk1aQ9D132 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk1aQ9D132 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk1aQ9D132 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk1aQ9D132 Flg-201ENSMUST00000050758 1488 ntBASIC16.22■□□□□ 0.19
Upk1aQ9D132 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Mtag2-201ENSMUST00000058665 714 ntBASIC16.22■□□□□ 0.19
Upk1aQ9D132 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Upk1aQ9D132 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Gm11927-201ENSMUST00000118472 759 ntBASIC16.21■□□□□ 0.19
Upk1aQ9D132 Gm11643-201ENSMUST00000119578 864 ntBASIC16.21■□□□□ 0.19
Upk1aQ9D132 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Gm27405-201ENSMUST00000184201 112 ntBASIC16.21■□□□□ 0.19
Upk1aQ9D132 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk1aQ9D132 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Upk1aQ9D132 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Upk1aQ9D132 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Upk1aQ9D132 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Upk1aQ9D132 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Upk1aQ9D132 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Rab3c-203ENSMUST00000224180 967 ntBASIC16.2■□□□□ 0.18
Upk1aQ9D132 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Upk1aQ9D132 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Mir5133-201ENSMUST00000174955 77 ntBASIC16.19■□□□□ 0.18
Upk1aQ9D132 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk1aQ9D132 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms