Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
Mms19Q9D071 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mms19Q9D071 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Mms19Q9D071 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Gm7638-201ENSMUST00000121348 967 ntBASIC18.3■□□□□ 0.52
Mms19Q9D071 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.3■□□□□ 0.52
Mms19Q9D071 Gm8969-201ENSMUST00000199694 526 ntBASIC18.3■□□□□ 0.52
Mms19Q9D071 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.3■□□□□ 0.52
Mms19Q9D071 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Mms19Q9D071 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mms19Q9D071 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mms19Q9D071 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.29■□□□□ 0.52
Mms19Q9D071 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mms19Q9D071 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Mms19Q9D071 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mms19Q9D071 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Mms19Q9D071 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mms19Q9D071 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mms19Q9D071 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mms19Q9D071 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Mms19Q9D071 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mms19Q9D071 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Gm37025-201ENSMUST00000195159 829 ntBASIC18.28■□□□□ 0.52
Mms19Q9D071 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.28■□□□□ 0.52
Mms19Q9D071 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mms19Q9D071 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mms19Q9D071 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mms19Q9D071 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Mms19Q9D071 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mms19Q9D071 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mms19Q9D071 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mms19Q9D071 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mms19Q9D071 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mms19Q9D071 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.27■□□□□ 0.51
Mms19Q9D071 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Mms19Q9D071 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mms19Q9D071 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mms19Q9D071 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.27■□□□□ 0.51
Mms19Q9D071 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Mms19Q9D071 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Mms19Q9D071 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.26■□□□□ 0.51
Mms19Q9D071 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.26■□□□□ 0.51
Mms19Q9D071 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Mms19Q9D071 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mms19Q9D071 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.26■□□□□ 0.51
Mms19Q9D071 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Mms19Q9D071 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mms19Q9D071 Gm7889-201ENSMUST00000185591 958 ntBASIC18.25■□□□□ 0.51
Mms19Q9D071 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.25■□□□□ 0.51
Mms19Q9D071 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mms19Q9D071 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mms19Q9D071 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.25■□□□□ 0.51
Mms19Q9D071 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.25■□□□□ 0.51
Mms19Q9D071 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mms19Q9D071 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Mms19Q9D071 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mms19Q9D071 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mms19Q9D071 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mms19Q9D071 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms