Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.06■□□□□ 0
Raet1eQ9CZQ6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1eQ9CZQ6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1eQ9CZQ6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1eQ9CZQ6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1eQ9CZQ6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1eQ9CZQ6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1eQ9CZQ6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1eQ9CZQ6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1eQ9CZQ6 Gm13401-201ENSMUST00000117074 291 ntBASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Gm6420-201ENSMUST00000193885 723 ntBASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1eQ9CZQ6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Nespas-201ENSMUST00000143738 1083 ntBASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Gm27454-201ENSMUST00000185090 204 ntBASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1eQ9CZQ6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms