Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt2Q9CZN7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shmt2Q9CZN7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Shmt2Q9CZN7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.34■□□□□ 0.21
Shmt2Q9CZN7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Shmt2Q9CZN7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Shmt2Q9CZN7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shmt2Q9CZN7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Shmt2Q9CZN7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shmt2Q9CZN7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt2Q9CZN7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt2Q9CZN7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt2Q9CZN7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt2Q9CZN7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt2Q9CZN7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Shmt2Q9CZN7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shmt2Q9CZN7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Gm11643-201ENSMUST00000119578 864 ntBASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shmt2Q9CZN7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shmt2Q9CZN7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shmt2Q9CZN7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Gm42545-201ENSMUST00000202755 922 ntBASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt2Q9CZN7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt2Q9CZN7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt2Q9CZN7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt2Q9CZN7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt2Q9CZN7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms