Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm10138-203ENSMUST00000206952 366 ntBASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snf8Q9CZ28 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Mir5133-201ENSMUST00000174955 77 ntBASIC17.62■□□□□ 0.41
Snf8Q9CZ28 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snf8Q9CZ28 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Gm6576-201ENSMUST00000169678 883 ntBASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.61■□□□□ 0.41
Snf8Q9CZ28 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.6■□□□□ 0.41
Snf8Q9CZ28 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Gm15375-201ENSMUST00000119510 849 ntBASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snf8Q9CZ28 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snf8Q9CZ28 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Snf8Q9CZ28 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snf8Q9CZ28 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Snf8Q9CZ28 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Snf8Q9CZ28 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Snf8Q9CZ28 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snf8Q9CZ28 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Gm12933-201ENSMUST00000120203 872 ntBASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Gm4968-201ENSMUST00000071458 858 ntBASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snf8Q9CZ28 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms