Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ssr1Q9CY50 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ssr1Q9CY50 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Gm10418-201ENSMUST00000100943 576 ntBASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.56■□□□□ 0.56
Ssr1Q9CY50 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ssr1Q9CY50 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ssr1Q9CY50 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Gm12896-201ENSMUST00000118430 226 ntBASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Mir2861-201ENSMUST00000175539 82 ntBASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.53■□□□□ 0.56
Ssr1Q9CY50 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ssr1Q9CY50 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ssr1Q9CY50 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ssr1Q9CY50 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ssr1Q9CY50 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ssr1Q9CY50 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ssr1Q9CY50 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms