Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc3Q9CW03 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Gm27275-201ENSMUST00000184318 272 ntBASIC20.12■□□□□ 0.81
Smc3Q9CW03 Gm42545-201ENSMUST00000202755 922 ntBASIC20.12■□□□□ 0.81
Smc3Q9CW03 Gm18025-201ENSMUST00000221733 862 ntBASIC20.12■□□□□ 0.81
Smc3Q9CW03 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc3Q9CW03 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.11■□□□□ 0.81
Smc3Q9CW03 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.11■□□□□ 0.81
Smc3Q9CW03 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.11■□□□□ 0.81
Smc3Q9CW03 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc3Q9CW03 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc3Q9CW03 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.09■□□□□ 0.81
Smc3Q9CW03 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.09■□□□□ 0.81
Smc3Q9CW03 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc3Q9CW03 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Haglr-201ENSMUST00000100000 2085 ntBASIC20.09■□□□□ 0.81
Smc3Q9CW03 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc3Q9CW03 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.08■□□□□ 0.81
Smc3Q9CW03 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc3Q9CW03 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc3Q9CW03 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc3Q9CW03 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc3Q9CW03 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.07■□□□□ 0.8
Smc3Q9CW03 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc3Q9CW03 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smc3Q9CW03 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.07■□□□□ 0.8
Smc3Q9CW03 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.07■□□□□ 0.8
Smc3Q9CW03 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc3Q9CW03 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc3Q9CW03 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms