Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Gm12382-201ENSMUST00000122005 922 ntBASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ccdc43Q9CR29 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Gm42545-201ENSMUST00000202755 922 ntBASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Gm18025-201ENSMUST00000221733 862 ntBASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc43Q9CR29 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc43Q9CR29 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc43Q9CR29 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Ccdc43Q9CR29 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc43Q9CR29 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc43Q9CR29 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Gm10653-202ENSMUST00000139570 835 ntBASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Gm6576-201ENSMUST00000169678 883 ntBASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc43Q9CR29 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc43Q9CR29 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Gm20760-201ENSMUST00000179197 648 ntBASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms