Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14□□□□□ -0.17
H2afb1Q9CQ70 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Gm10517-202ENSMUST00000192970 758 ntBASIC14□□□□□ -0.17
H2afb1Q9CQ70 Trmt13-210ENSMUST00000198454 880 ntBASIC14□□□□□ -0.17
H2afb1Q9CQ70 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb1Q9CQ70 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Gm37856-201ENSMUST00000191634 999 ntBASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
H2afb1Q9CQ70 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb1Q9CQ70 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H2afb1Q9CQ70 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
H2afb1Q9CQ70 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb1Q9CQ70 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
H2afb1Q9CQ70 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb1Q9CQ70 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.97□□□□□ -0.17
H2afb1Q9CQ70 Gm24841-201ENSMUST00000158676 357 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms