Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.72■□□□□ 0.27
Trim16Q99PP9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.72■□□□□ 0.27
Trim16Q99PP9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim16Q99PP9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.71■□□□□ 0.27
Trim16Q99PP9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim16Q99PP9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim16Q99PP9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.7■□□□□ 0.26
Trim16Q99PP9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim16Q99PP9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim16Q99PP9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.69■□□□□ 0.26
Trim16Q99PP9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim16Q99PP9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim16Q99PP9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim16Q99PP9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms