Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Phf7-203ENSMUST00000226565 1971 ntBASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Gm24513-201ENSMUST00000174964 138 ntBASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.45■□□□□ 0.38
Cdh23Q99PF4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh23Q99PF4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Gm27397-201ENSMUST00000184997 107 ntBASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh23Q99PF4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Gm14140-201ENSMUST00000119999 995 ntBASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Gm26308-201ENSMUST00000157768 69 ntBASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh23Q99PF4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Rprl3-201ENSMUST00000157400 290 ntBASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh23Q99PF4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh23Q99PF4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms