Protein–RNA interactions for Protein: Q99MJ9

Ddx50, ATP-dependent RNA helicase DDX50, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx50Q99MJ9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx50Q99MJ9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx50Q99MJ9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ddx50Q99MJ9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx50Q99MJ9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ddx50Q99MJ9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx50Q99MJ9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.52■□□□□ 0.55
Ddx50Q99MJ9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.52■□□□□ 0.55
Ddx50Q99MJ9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx50Q99MJ9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx50Q99MJ9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx50Q99MJ9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx50Q99MJ9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Gm10576-201ENSMUST00000191927 825 ntBASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx50Q99MJ9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Gm10060-201ENSMUST00000212002 111 ntBASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Ddx50Q99MJ9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Gm15467-201ENSMUST00000120582 445 ntBASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Gm2756-201ENSMUST00000195851 400 ntBASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx50Q99MJ9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx50Q99MJ9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.47■□□□□ 0.55
Ddx50Q99MJ9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx50Q99MJ9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx50Q99MJ9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms