Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx6-1Q99MA9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx6-1Q99MA9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Golph3-205ENSMUST00000228671 2842 ntBASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx6-1Q99MA9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx6-1Q99MA9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx6-1Q99MA9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx6-1Q99MA9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx6-1Q99MA9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gm11336-201ENSMUST00000118168 334 ntBASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gm2651-201ENSMUST00000203560 838 ntBASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx6-1Q99MA9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.94■□□□□ 0.14
Nkx6-1Q99MA9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms