Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.98□□□□□ -0.01
Scrt1Q99M85 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.98□□□□□ -0.01
Scrt1Q99M85 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.98□□□□□ -0.01
Scrt1Q99M85 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Gm7638-201ENSMUST00000121348 967 ntBASIC14.98□□□□□ -0.01
Scrt1Q99M85 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scrt1Q99M85 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.98□□□□□ -0.01
Scrt1Q99M85 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.97□□□□□ -0.01
Scrt1Q99M85 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.97□□□□□ -0.01
Scrt1Q99M85 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scrt1Q99M85 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.96□□□□□ -0.01
Scrt1Q99M85 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scrt1Q99M85 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scrt1Q99M85 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.95□□□□□ -0.02
Scrt1Q99M85 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Gm5867-201ENSMUST00000063197 592 ntBASIC14.95□□□□□ -0.02
Scrt1Q99M85 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scrt1Q99M85 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.95□□□□□ -0.02
Scrt1Q99M85 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.94□□□□□ -0.02
Scrt1Q99M85 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Gm13474-201ENSMUST00000122466 815 ntBASIC14.94□□□□□ -0.02
Scrt1Q99M85 Gm9013-201ENSMUST00000132939 882 ntBASIC14.94□□□□□ -0.02
Scrt1Q99M85 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms