Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcc1Q99LI2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcc1Q99LI2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcc1Q99LI2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.89■□□□□ 0.3
Clcc1Q99LI2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
Clcc1Q99LI2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Clcc1Q99LI2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Gm13474-201ENSMUST00000122466 815 ntBASIC16.89■□□□□ 0.29
Clcc1Q99LI2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcc1Q99LI2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcc1Q99LI2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Il3ra-202ENSMUST00000223589 738 ntBASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcc1Q99LI2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms