Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lysmd3Q99LE3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.72■□□□□ 0.43
Lysmd3Q99LE3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Gm7213-201ENSMUST00000215977 950 ntBASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd3Q99LE3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Lysmd3Q99LE3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lysmd3Q99LE3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Lysmd3Q99LE3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd3Q99LE3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms