Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cstf1Q99LC2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cstf1Q99LC2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Cstf1Q99LC2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.07■□□□□ 0.32
Cstf1Q99LC2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cstf1Q99LC2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cstf1Q99LC2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.04■□□□□ 0.32
Cstf1Q99LC2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Gm12895-201ENSMUST00000122214 226 ntBASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cstf1Q99LC2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cstf1Q99LC2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Gm10052-201ENSMUST00000168019 960 ntBASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Gm37935-201ENSMUST00000192012 982 ntBASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Gm7729-201ENSMUST00000050143 801 ntBASIC17.02■□□□□ 0.32
Cstf1Q99LC2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Cstf1Q99LC2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cstf1Q99LC2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cstf1Q99LC2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cstf1Q99LC2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cstf1Q99LC2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cstf1Q99LC2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Gm18206-201ENSMUST00000207027 926 ntBASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Gm18195-201ENSMUST00000207604 706 ntBASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms