Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smarcd2Q99JR8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd2Q99JR8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd2Q99JR8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd2Q99JR8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd2Q99JR8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smarcd2Q99JR8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Phf7-203ENSMUST00000226565 1971 ntBASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Gm12895-201ENSMUST00000122214 226 ntBASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Gm28659-201ENSMUST00000188013 759 ntBASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd2Q99JR8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms