Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.2■□□□□ 0.82
Col20a1Q923P0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.2■□□□□ 0.82
Col20a1Q923P0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.19■□□□□ 0.82
Col20a1Q923P0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col20a1Q923P0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.18■□□□□ 0.82
Col20a1Q923P0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.18■□□□□ 0.82
Col20a1Q923P0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col20a1Q923P0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Ank2-226ENSMUST00000189368 339 ntBASIC20.17■□□□□ 0.82
Col20a1Q923P0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Col20a1Q923P0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col20a1Q923P0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col20a1Q923P0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col20a1Q923P0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col20a1Q923P0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col20a1Q923P0 Mir770-201ENSMUST00000103252 94 ntBASIC20.16■□□□□ 0.82
Col20a1Q923P0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col20a1Q923P0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.16■□□□□ 0.82
Col20a1Q923P0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col20a1Q923P0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col20a1Q923P0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Gm13186-201ENSMUST00000118031 316 ntBASIC20.15■□□□□ 0.82
Col20a1Q923P0 Gm6623-201ENSMUST00000173570 544 ntBASIC20.15■□□□□ 0.82
Col20a1Q923P0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col20a1Q923P0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col20a1Q923P0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col20a1Q923P0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col20a1Q923P0 Gm9103-201ENSMUST00000119371 405 ntBASIC20.12■□□□□ 0.81
Col20a1Q923P0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms