Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Gm13474-201ENSMUST00000122466 815 ntBASIC19.69■□□□□ 0.74
Smc1bQ920F6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smc1bQ920F6 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.69■□□□□ 0.74
Smc1bQ920F6 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.68■□□□□ 0.74
Smc1bQ920F6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Gm27389-201ENSMUST00000183622 195 ntBASIC19.68■□□□□ 0.74
Smc1bQ920F6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.68■□□□□ 0.74
Smc1bQ920F6 Gm18669-201ENSMUST00000216049 778 ntBASIC19.68■□□□□ 0.74
Smc1bQ920F6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc1bQ920F6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Gm21559-201ENSMUST00000220638 855 ntBASIC19.67■□□□□ 0.74
Smc1bQ920F6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Gm8587-201ENSMUST00000076538 843 ntBASIC19.67■□□□□ 0.74
Smc1bQ920F6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc1bQ920F6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Gm9013-201ENSMUST00000132939 882 ntBASIC19.66■□□□□ 0.74
Smc1bQ920F6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.66■□□□□ 0.74
Smc1bQ920F6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.66■□□□□ 0.74
Smc1bQ920F6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc1bQ920F6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Gm29518-201ENSMUST00000190858 372 ntBASIC19.65■□□□□ 0.74
Smc1bQ920F6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smc1bQ920F6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc1bQ920F6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.64■□□□□ 0.74
Smc1bQ920F6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Smc1bQ920F6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc1bQ920F6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc1bQ920F6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc1bQ920F6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms