Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha9Q91Y11 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha9Q91Y11 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Gm2274-201ENSMUST00000184539 609 ntBASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Gm43799-201ENSMUST00000201845 579 ntBASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha9Q91Y11 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Gm27000-201ENSMUST00000182943 842 ntBASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdha9Q91Y11 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Gm18958-201ENSMUST00000174258 762 ntBASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdha9Q91Y11 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha9Q91Y11 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Pcdha9Q91Y11 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms