Protein–RNA interactions for Protein: Q91Y03

Pcdhb16, MCG141291, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb16Q91Y03 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb16Q91Y03 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb16Q91Y03 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb16Q91Y03 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb16Q91Y03 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb16Q91Y03 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb16Q91Y03 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb16Q91Y03 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Gm6754-201ENSMUST00000117124 913 ntBASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Gm43371-201ENSMUST00000202838 1031 ntBASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb16Q91Y03 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb16Q91Y03 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb16Q91Y03 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb16Q91Y03 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb16Q91Y03 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb16Q91Y03 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb16Q91Y03 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb16Q91Y03 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb16Q91Y03 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb16Q91Y03 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms