Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb2Q91Y00 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Gm18959-201ENSMUST00000208954 655 ntBASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Il3ra-202ENSMUST00000223589 738 ntBASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb2Q91Y00 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb2Q91Y00 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhb2Q91Y00 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Rarb-207ENSMUST00000225921 2756 ntBASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb2Q91Y00 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb2Q91Y00 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb2Q91Y00 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms