Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Gm5408-201ENSMUST00000197998 747 ntBASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhb3Q91XZ7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb3Q91XZ7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb3Q91XZ7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb3Q91XZ7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb3Q91XZ7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb3Q91XZ7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhb3Q91XZ7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb3Q91XZ7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb3Q91XZ7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb3Q91XZ7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms