Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Gm29518-201ENSMUST00000190858 372 ntBASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc5Q91XW9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Gm17807-201ENSMUST00000186869 298 ntBASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Gm5587-201ENSMUST00000206270 674 ntBASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgc5Q91XW9 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc5Q91XW9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Gm17808-201ENSMUST00000200859 894 ntBASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc5Q91XW9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Gm24841-201ENSMUST00000158676 357 ntBASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Gm27389-201ENSMUST00000183622 195 ntBASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms