Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx41Q91VN6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx41Q91VN6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx41Q91VN6 Gm29791-202ENSMUST00000207888 369 ntBASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.58■□□□□ 0.72
Ddx41Q91VN6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Gm24841-201ENSMUST00000158676 357 ntBASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Gm2274-201ENSMUST00000184539 609 ntBASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx41Q91VN6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Gm18032-201ENSMUST00000222541 538 ntBASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx41Q91VN6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms