Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.2■□□□□ 0.5
TraipQ8VIG6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Gm45328-201ENSMUST00000210942 917 ntBASIC18.19■□□□□ 0.5
TraipQ8VIG6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TraipQ8VIG6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TraipQ8VIG6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Gm18115-201ENSMUST00000221209 621 ntBASIC18.18■□□□□ 0.5
TraipQ8VIG6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TraipQ8VIG6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Gm9103-201ENSMUST00000119371 405 ntBASIC18.17■□□□□ 0.5
TraipQ8VIG6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.17■□□□□ 0.5
TraipQ8VIG6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.17■□□□□ 0.5
TraipQ8VIG6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TraipQ8VIG6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Mir770-201ENSMUST00000103252 94 ntBASIC18.16■□□□□ 0.5
TraipQ8VIG6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Gm6623-201ENSMUST00000173570 544 ntBASIC18.16■□□□□ 0.5
TraipQ8VIG6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
TraipQ8VIG6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Gm27357-201ENSMUST00000183754 135 ntBASIC18.15■□□□□ 0.5
TraipQ8VIG6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms