Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 BC021767-201ENSMUST00000126387 1716 ntBASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.69□□□□□ -0.06
Cspg4Q8VHY0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.68□□□□□ -0.06
Cspg4Q8VHY0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cspg4Q8VHY0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Gm12644-201ENSMUST00000119935 606 ntBASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Psmb5-202ENSMUST00000227257 622 ntBASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Cspg4Q8VHY0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cspg4Q8VHY0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms