Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Gm7291-201ENSMUST00000199147 382 ntBASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh18Q8VHR0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh18Q8VHR0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh18Q8VHR0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Gm6211-202ENSMUST00000167849 925 ntBASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh18Q8VHR0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.46■□□□□ 0.22
Pcdh18Q8VHR0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh18Q8VHR0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh18Q8VHR0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh18Q8VHR0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh18Q8VHR0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms