Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Gm43347-201ENSMUST00000200226 580 ntBASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71Q8VEG0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Mir8098-201ENSMUST00000184011 137 ntBASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc71Q8VEG0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Gm13884-201ENSMUST00000118103 829 ntBASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71Q8VEG0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Gm44450-201ENSMUST00000199528 114 ntBASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71Q8VEG0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71Q8VEG0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Gm15372-201ENSMUST00000120729 834 ntBASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Gm29707-201ENSMUST00000196325 491 ntBASIC17.65■□□□□ 0.42
Ccdc71Q8VEG0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms