Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44357-201ENSMUST00000195897 142 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm19658-201ENSMUST00000196231 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44367-201ENSMUST00000196836 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44350-201ENSMUST00000197197 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44390-201ENSMUST00000197533 144 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44313-201ENSMUST00000198018 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44486-201ENSMUST00000198508 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44454-201ENSMUST00000198541 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44314-201ENSMUST00000199263 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44394-201ENSMUST00000199558 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44484-201ENSMUST00000199873 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44466-201ENSMUST00000200264 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm44359-201ENSMUST00000200671 138 ntBASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lmcd1Q8VEE1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lmcd1Q8VEE1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lmcd1Q8VEE1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Gm24513-201ENSMUST00000174964 138 ntBASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Auts2-212ENSMUST00000178555 309 ntBASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lmcd1Q8VEE1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lmcd1Q8VEE1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lmcd1Q8VEE1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Gm27397-201ENSMUST00000184997 107 ntBASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms