Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.62■□□□□ 0.41
Uhrf1Q8VDF2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uhrf1Q8VDF2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uhrf1Q8VDF2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Gm11452-201ENSMUST00000122376 690 ntBASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Gm5867-201ENSMUST00000063197 592 ntBASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uhrf1Q8VDF2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.58■□□□□ 0.41
Uhrf1Q8VDF2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Gm10052-201ENSMUST00000168019 960 ntBASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Gm7729-201ENSMUST00000050143 801 ntBASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uhrf1Q8VDF2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.57■□□□□ 0.4
Uhrf1Q8VDF2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uhrf1Q8VDF2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uhrf1Q8VDF2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uhrf1Q8VDF2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.57■□□□□ 0.4
Uhrf1Q8VDF2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms