Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnajc28Q8VCE1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Gm25016-201ENSMUST00000158399 131 ntBASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnajc28Q8VCE1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Dnajc28Q8VCE1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Dnajc28Q8VCE1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnajc28Q8VCE1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnajc28Q8VCE1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Gm27741-201ENSMUST00000185060 237 ntBASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Gm7370-201ENSMUST00000219471 767 ntBASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnajc28Q8VCE1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Gm27389-201ENSMUST00000183622 195 ntBASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dnajc28Q8VCE1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dnajc28Q8VCE1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms