Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc9Q8VC31 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc9Q8VC31 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc9Q8VC31 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc9Q8VC31 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc9Q8VC31 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc9Q8VC31 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc9Q8VC31 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Gm12821-201ENSMUST00000120022 600 ntBASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc9Q8VC31 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc9Q8VC31 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Gm43137-201ENSMUST00000198052 594 ntBASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccdc9Q8VC31 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc9Q8VC31 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc9Q8VC31 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms