Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slf1Q8R3P9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slf1Q8R3P9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slf1Q8R3P9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.33■□□□□ 0.36
Slf1Q8R3P9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.32■□□□□ 0.36
Slf1Q8R3P9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Slf1Q8R3P9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.3■□□□□ 0.36
Slf1Q8R3P9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slf1Q8R3P9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slf1Q8R3P9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.28■□□□□ 0.36
Slf1Q8R3P9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms