Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Il3ra-202ENSMUST00000223589 738 ntBASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf7Q8R0S1 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Gm21814-202ENSMUST00000203277 873 ntBASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Gm3375-201ENSMUST00000203929 796 ntBASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf7Q8R0S1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Mir5122-201ENSMUST00000175004 89 ntBASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.16■□□□□ 0.82
Atf7Q8R0S1 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf7Q8R0S1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atf7Q8R0S1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Atf7Q8R0S1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Atf7Q8R0S1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.14■□□□□ 0.82
Atf7Q8R0S1 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.14■□□□□ 0.82
Atf7Q8R0S1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms