Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tram1l1Q8QZR0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tram1l1Q8QZR0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tram1l1Q8QZR0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tram1l1Q8QZR0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tram1l1Q8QZR0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Mir770-201ENSMUST00000103252 94 ntBASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tram1l1Q8QZR0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.12■□□□□ 0.33
Tram1l1Q8QZR0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tram1l1Q8QZR0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Gm8969-201ENSMUST00000199694 526 ntBASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tram1l1Q8QZR0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tram1l1Q8QZR0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.09■□□□□ 0.33
Tram1l1Q8QZR0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms