Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Gm19721-201ENSMUST00000195284 1764 ntBASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx54Q8K4L0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx54Q8K4L0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Gm14494-201ENSMUST00000118786 435 ntBASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Auts2-212ENSMUST00000178555 309 ntBASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.37■■□□□ 1.17
Ddx54Q8K4L0 Notumos-201ENSMUST00000151998 2659 ntBASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Gm27000-201ENSMUST00000182943 842 ntBASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx54Q8K4L0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx54Q8K4L0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx54Q8K4L0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 197.9 ms