Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shtn1Q8K2Q9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Shtn1Q8K2Q9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Idnk-204ENSMUST00000226010 1898 ntBASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shtn1Q8K2Q9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shtn1Q8K2Q9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.09■□□□□ 0.81
Shtn1Q8K2Q9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shtn1Q8K2Q9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shtn1Q8K2Q9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.08■□□□□ 0.8
Shtn1Q8K2Q9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Shtn1Q8K2Q9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shtn1Q8K2Q9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shtn1Q8K2Q9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shtn1Q8K2Q9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Gm18733-201ENSMUST00000173950 856 ntBASIC20.07■□□□□ 0.8
Shtn1Q8K2Q9 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms