Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim68Q8K243 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim68Q8K243 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim68Q8K243 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim68Q8K243 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim68Q8K243 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim68Q8K243 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim68Q8K243 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim68Q8K243 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim68Q8K243 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim68Q8K243 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
Trim68Q8K243 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim68Q8K243 Gm21559-201ENSMUST00000220638 855 ntBASIC18.55■□□□□ 0.56
Trim68Q8K243 Gm8587-201ENSMUST00000076538 843 ntBASIC18.55■□□□□ 0.56
Trim68Q8K243 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim68Q8K243 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim68Q8K243 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.54■□□□□ 0.56
Trim68Q8K243 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim68Q8K243 Gm4974-201ENSMUST00000209974 875 ntBASIC18.54■□□□□ 0.56
Trim68Q8K243 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim68Q8K243 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
Trim68Q8K243 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim68Q8K243 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim68Q8K243 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Trim68Q8K243 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim68Q8K243 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Gm5587-201ENSMUST00000206270 674 ntBASIC18.53■□□□□ 0.56
Trim68Q8K243 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim68Q8K243 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.52■□□□□ 0.56
Trim68Q8K243 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim68Q8K243 Gm29518-201ENSMUST00000190858 372 ntBASIC18.52■□□□□ 0.56
Trim68Q8K243 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim68Q8K243 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trim68Q8K243 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trim68Q8K243 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trim68Q8K243 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim68Q8K243 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim68Q8K243 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim68Q8K243 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim68Q8K243 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim68Q8K243 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Gm27389-201ENSMUST00000183622 195 ntBASIC18.51■□□□□ 0.55
Trim68Q8K243 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim68Q8K243 Gm44771-201ENSMUST00000206975 626 ntBASIC18.51■□□□□ 0.55
Trim68Q8K243 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Gm7791-201ENSMUST00000219066 539 ntBASIC18.51■□□□□ 0.55
Trim68Q8K243 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim68Q8K243 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim68Q8K243 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim68Q8K243 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim68Q8K243 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim68Q8K243 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.5■□□□□ 0.55
Trim68Q8K243 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim68Q8K243 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim68Q8K243 Gm7153-201ENSMUST00000117092 455 ntBASIC18.5■□□□□ 0.55
Trim68Q8K243 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim68Q8K243 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim68Q8K243 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim68Q8K243 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Trim68Q8K243 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim68Q8K243 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.5■□□□□ 0.55
Trim68Q8K243 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms