Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Mir6982-201ENSMUST00000184354 68 ntBASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn1Q8K0T0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn1Q8K0T0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.73■□□□□ 0.75
Rtn1Q8K0T0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn1Q8K0T0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Gm13436-201ENSMUST00000120418 567 ntBASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn1Q8K0T0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn1Q8K0T0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms