Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgcs1Q8JZK9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgcs1Q8JZK9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgcs1Q8JZK9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Gm37856-201ENSMUST00000191634 999 ntBASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcs1Q8JZK9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hmgcs1Q8JZK9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Trmt13-210ENSMUST00000198454 880 ntBASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Gm4974-201ENSMUST00000209974 875 ntBASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgcs1Q8JZK9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Gm18666-201ENSMUST00000190039 958 ntBASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmgcs1Q8JZK9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms