Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Actl10-202ENSMUST00000226583 1501 ntBASIC16.64■□□□□ 0.25
Rdh1Q8CGV4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh1Q8CGV4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rdh1Q8CGV4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh1Q8CGV4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh1Q8CGV4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Gm25016-201ENSMUST00000158399 131 ntBASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Gm27000-201ENSMUST00000182943 842 ntBASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Gm33142-201ENSMUST00000193913 867 ntBASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Gm8969-201ENSMUST00000199694 526 ntBASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh1Q8CGV4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh1Q8CGV4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Gm5587-201ENSMUST00000206270 674 ntBASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh1Q8CGV4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Gm11355-201ENSMUST00000121120 306 ntBASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Gm9013-201ENSMUST00000132939 882 ntBASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rdh1Q8CGV4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rdh1Q8CGV4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms