Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Il3ra-202ENSMUST00000223589 738 ntBASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm28Q8CGC6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Gm7367-201ENSMUST00000057611 492 ntBASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Rbm28Q8CGC6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Gm7370-201ENSMUST00000219471 767 ntBASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm28Q8CGC6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm28Q8CGC6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm28Q8CGC6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.18■□□□□ 0.82
Rbm28Q8CGC6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Gm10819-201ENSMUST00000099988 561 ntBASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms